| |
Manuscript
Title: Microarray
analysis of gene expression in soybean roots susceptible to the soybean cyst
nematode two days post invasion
Authors: R. Khan, N. Alkharouf, H. Beard, I. Chouikha, S. Meyer, J.
Grefenstette, H. Knap and B. Matthews.
Accepted for publication in the Journal of Nematology
* Raw Data
* Normalized Data
* Boxplots data
Significance Analysis of Microarrays (SAM) output:
| Input Parameters |
| Imputation Engine |
10-Nearest Neighbor Imputer |
| Data Type |
One class Response |
| Number of Permutations |
6 |
| Blocked Permutation? |
FALSE |
| RNG Seed |
97662912 |
| Delta |
0.29077 |
| (Upper Cutoff, Lower
Cutoff) |
(0.38171, -1.16301) |
| Computed Quantities |
| Computed Exchangeability
Factor S0 |
0.416930448 |
| S0 percentile |
1 |
| False Significant Number
(Median, 90 percentile) |
(10.12340, 45.68511) |
| False Discovery Rate
(Median, 90 percentile) |
(10.12340, 45.68511) |
| Pi0Hat |
0.51915 |
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